BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F01SP1|AL428573
(352 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig363 688 0.0
>3x_Contig363
Length = 1726
Score = 688 bits (345), Expect = 0.0
Identities = 347/349 (99%)
Strand = Plus / Minus
Query: 4 ttattaactttcccgttggactaccggccttcaaccgaagaaaagtctggatgccccaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 ttattaactttcccgttggactaccggccttcaaccgaagaaaagtctggatgccccaac 1208
Query: 64 gaatctcctgatattgaattcatgtatgtacctggccacttgattcawatgctatttgaa 123
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1207 gaatctcctgatattgaattcatgtatgtacctggccacttgattcatatgctatttgaa 1148
Query: 124 actttaaagaatgcgctaagagccactgtcgaaaagactatcgaaaaaaatccatctgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 actttaaagaatgcgctaagagccactgtcgaaaagactatcgaaaaaaatccatctgtg 1088
Query: 184 gataagtatgacttgaagttcccggacgttaaagttatcataacagagggtacggaagac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 gataagtatgacttgaagttcccggacgttaaagttatcataacagagggtacggaagac 1028
Query: 244 ttgactgtaaagatttcagatgaaggtggcggtatagcaaggtcgaacttgccgttagta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 ttgactgtaaagatttcagatgaaggtggcggtatagcaaggtcgaacttgccgttagta 968
Query: 304 tggacatatctctacacaactatgcctgaaaatragcaaattggattga 352
||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 967 tggacatatctctacacaactatgcctgaaaatgagcaaattggattga 919
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1994
Number of Sequences: 1807
Number of extensions: 1994
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 352
length of database: 10,358,551
effective HSP length: 15
effective length of query: 337
effective length of database: 10,331,446
effective search space: 3481697302
effective search space used: 3481697302
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.2 bits)